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- Metadata-Version: 2.1
- Name: pysam
- Version: 0.18.0
- Summary: pysam
- Home-page: https://github.com/pysam-developers/pysam
- Author: Andreas Heger
- Author-email: andreas.heger@gmail.com
- License: MIT
- Platform: POSIX
- Platform: UNIX
- Platform: MacOS
- Classifier: Development Status :: 4 - Beta
- Classifier: Intended Audience :: Science/Research
- Classifier: Intended Audience :: Developers
- Classifier: License :: OSI Approved
- Classifier: Programming Language :: Python
- Classifier: Topic :: Software Development
- Classifier: Topic :: Scientific/Engineering
- Classifier: Operating System :: POSIX
- Classifier: Operating System :: Unix
- Classifier: Operating System :: MacOS
- Requires: cython (>=0.29.12)
- License-File: COPYING
- License-File: AUTHORS
-
- pysam - a python module for reading, manipulating and writing
- genomic data sets.
-
- pysam is a lightweight wrapper of the htslib C-API and provides
- facilities to read and write SAM/BAM/VCF/BCF/BED/GFF/GTF/FASTA/FASTQ
- files as well as access to the command line functionality of the
- samtools and bcftools packages. The module supports compression and
- random access through indexing.
-
- This module provides a low-level wrapper around the htslib C-API as
- using cython and a high-level API for convenient access to the data
- within standard genomic file formats.
-
- See:
- http://www.htslib.org
- https://github.com/pysam-developers/pysam
- http://pysam.readthedocs.org/en/stable
-
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