|
- from array import array
- from typing import Iterable, Optional, Tuple, Union
-
- def get_encoding_error_handler() -> str: ...
- def set_encoding_error_handler(name: str) -> str: ...
- def _pysam_dispatch(
- collection: str,
- method: str,
- args: Optional[Iterable[str]],
- catch_stdout: bool = ...,
- is_usage: bool = ...,
- save_stdout: Optional[str] = ...,
- ) -> Tuple[int, Union[bytes, str], Union[bytes, str]]: ...
- def parse_region(
- contig: Optional[str] = ...,
- start: Optional[int] = ...,
- stop: Optional[int] = ...,
- region: Optional[str] = ...,
- reference: Optional[str] = ...,
- end: Optional[int] = ...,
- ) -> Tuple[str, int, int]: ...
- def qualitystring_to_array(
- input_str: Optional[str], offset: int = ...
- ) -> Optional[array]: ...
- def array_to_qualitystring(qualities: array, offset: int = ...) -> Optional[str]: ...
- def qualities_to_qualitystring(
- qualities: Union[array, Iterable[str]], offset: int = ...
- ) -> Optional[str]: ...
|
